Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAVKVAINGFGRIGRLAFRRIQEVEGLEVVAVNDLTDDDMLAHLLKYDTMQGRFTGEVEVVDGGFRVNGKEVKSFSEPDASKLPWKDLNIDVVLECTGFYTDKDKAQAHIEAGAKKVLISAPATGDLKTIVFNTNHQELDGSETVVSGASCTTNSLAPVAKVLNDDFGLVEGLMTTIHAYTGDQNTQDAPHRKGDKRRARAAAENIIPNSTGAAKAIGKVIPEIDGKLDGGAQRVPVATGSLTELTVVLEKQDVTVEQVNEAMKNASNES----FGYTEDEIVSSDVVGMTYGSLFDATQTRVMSVGDRQLVKVAAWYDNEMSYTAQLVRTLAYLAELSK
4P8R Chain:B ((9-339))MVIRVGINGFGRIGRVVFRAAQRRNDIEIVGINDLLDADYMAYMLKYDSTHGRFEGAVEVQGGALVVNGKKIRVTSERDPANLKWNEINVDVVVESTGLFLSDDTARKHIQAGAKKVVITGPSKDDTPMFVMGVNHTTYKG-EAIVSNASCTTNCLAPLAKVLNDKFGIVEGLMTTVHATTATQKTVDGPSQK-DWRGGRGAAQNIIPSSTGAAKAVGKIIPSLNGKLTGMAFRVPTPNVSVVDLTVRLERP-ATYKQICDAIKAASEGELKGILGYVDEEIVSSDINGIPLTSVFDARAG--ISLND-NFVKLVSWYDNETGYSNKVLDLIAHITK---


General information:
TITO was launched using:
RESULT:

Template: 4P8R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -151714 for 2843 contacts (-53.4/contact) +
2D Compatibility (PS) -34714 + (NN) -8539 + (LL) 328
1D Compatibility (HY) -30400 + (ID) 8300
Total energy: -233339.0 ( -82.07 by residue)
QMean score : 0.473

(partial model without unconserved sides chains):
PDB file : Tito_4P8R.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4P8R-query.scw
PDB file : Tito_Scwrl_4P8R.pdb: