Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEYLLSAGICMAIVSILLIGMAISNVSKGQYAKRFFFFATSCLVLTLVVVSSLSSSANASQTDNGVNRSGSEDPTVYSATSTKKLHKEPATLIKAIDGDTVKLMYKGQPMTFRLLLVDTPETKHPKKGVEKYGPEASAFTKKMVENANKIEVEFDKGQRTDKYGRGLAYIYADGKMVNEALVRQGLAKVAYVYKPNNTHEQLLRKSEAQAKKEKLNIWSEDNADSGQ
3OSO Chain:A ((7-135))
-------------------------------------------------------------------------------------LHKEPATLIKAIDGDTVKAMYKGQPMTFRLLLVDTPEFN------EKYGPEASAFTKKMVENAKKIEVEFDKGQRTDKYGRGLAYIYADGKMVNEALVRQGLAKVAYVYKGNNTHEQLLRKAEAQAKKEKLNIWS--------
General information:
TITO was launched using:
RESULT:
Template:
3OSO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55130 for 1046 contacts (-52.7/contact) +
2D Compatibility (PS) -13869 + (NN) -4173 + (LL) 6020
1D Compatibility (HY) -15200 + (ID) 6150
Total energy: -88502.0 ( -84.61 by residue)
QMean score : 0.628
(partial model without unconserved sides chains):
PDB file :
Tito_3OSO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OSO-query.scw
PDB file :
Tito_Scwrl_3OSO.pdb
: