Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNKPIGVIDSGVGGLTVAKEIMRQLPNETIYYLGDIGRCPYGPRPGEQVKQYTVEIARKLMEFDIKMLVIACNTATAVALEYLQKTLSIPVIGVIEPGARTAIMTTRNQNVLVLGTEGTIKSEAYRTHIKRINPHVEVHGVACPGFVPLVEQMRYSDPTITSIVIHQTLKRWRNSESDTVILGCTHYPLLYKPIYDYFGGKKTVISSGLETAREVSALLTFSNEHASYTEHPDHRFFATGDPTHITNIIKEWLNLSVNVERISVND
1B74 Chain:A ((1-252))
--MKIGIFDSGVGGLTVLKAIRNRYRKVDIVYLGDTARVPYGIRSKDTIIRYSLECAGFLKDKGVDIIVVACNTASAYALERLKKEINVPVFGVIEPGVKEALKKSRNKKIGVIGTPATVKSGAYQRKLEEGGADVFAKA--CPLFAPLAEEGLLEGEI-TRKVVEHYLKEFKG-KIDTLILGCTHYPLLKKEIKKFLG-DAEVVDSSEALSLSLHNFIKDDGSS-------SLELFFTDLSPNLQFLIKLILGRDYPVKLAEGVF
General information:
TITO was launched using:
RESULT:
Template:
1B74.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -201431 for 2169 contacts (-92.9/contact) +
2D Compatibility (PS) -26865 + (NN) -5351 + (LL) 736
1D Compatibility (HY) -21600 + (ID) 4600
Total energy: -259111.0 ( -119.46 by residue)
QMean score : 0.484
(partial model without unconserved sides chains):
PDB file :
Tito_1B74.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B74-query.scw
PDB file :
Tito_Scwrl_1B74.pdb
: