Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEVKTFYNGNTMPQIGLGTF---RVENDENCMESVKYAIEQGYRSIDTAKVYGNEEQVGAGIRAGLESTGIAREDLFITSKLYFEDFGRENVAAAYEASLSRLGLKYLDLYLVHWPGT------------------NEAVMVDTWKGMEDLYKNNKAKNIGVSNFEPEHLEALLAQVSIK--PVINQVEYHPYLTQHKLKLYLAAQHIVMESWSPLMNAQ-----------ILNDETIKDIAQELGKSPAQVVLRWNVQHGVVIIPKSVTPNRISENFQIFDFELSDEQMTRIDGLNQDKRIGPDPKTFEG |
| 3UZW Chain:A ((34-328)) | -------DGNSIPIIGLGTYSEPKSTPKGACATSVKVAIDTGYRHIDGAYIYQNEHEVGEAIREKIAEGKVRREDIFYCGKLWATNHVPEMVRPTLERTLRVLQLDYVDLYIIHVPMAFKPGDEIYPRDENGKWLYHKSNLCATWEAMEACKDAGLVKSLGVSNFNRRQLELILNKPGLKHKPVSNQVECHPYFTQPKLLKFCQQHDIVITAYSPLGTSRNPIWVNVSSPPLLKDALLNSLGKRYNKTAAQIVLRFNIQRGVVVIPKSFNLERIKENFQIFDFSLTEEEMKDIEALNKNVRF--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UZW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -103480 for 2182 contacts (-47.4/contact) +
2D Compatibility (PS) -28014 + (NN) -11409 + (LL) 496
1D Compatibility (HY) -29200 + (ID) 5550
Total energy: -177157.0 ( -81.19 by residue)
QMean score : 0.454
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