Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIELWPAIDLIG--STSVRLTEGKYDSEEKMSRSAEESIAYYSQFECVNRIHIVDLIGAKAQYAREFDYIKSLRRLTTKDIEVGGGIRTKSQIMDYFAAGINYCIVGTKGIQDTDWLKEMAHTFPG---RIYLSVDAYG----EDIKVNGWEEDTELNLFSFVRQLSDIPLGGIIYTDIAKDGKMSGPNFELTGQLVKATTIPVIASGGIRHQQDIQRLASLNVHAAIIGKAAHQASFWEGLE
2W6R Chain:A ((1-233))
MQRVVVAIDAKRVDGEFMVFTHSGKKN---TGILLRDWVVEVE-KRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAGADKALAASVF---MRELKEYLK----SGQAVVVAIDAKRVDGEFMVFTHSGKKNTGILLRDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAGADAALAASVFH---------
General information:
TITO was launched using:
RESULT:
Template:
2W6R.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -119249 for 1864 contacts (-64.0/contact) +
2D Compatibility (PS) -22482 + (NN) -1596 + (LL) 1248
1D Compatibility (HY) -3200 + (ID) 2250
Total energy: -147529.0 ( -79.15 by residue)
QMean score : 0.452
(partial model without unconserved sides chains):
PDB file :
Tito_2W6R.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2W6R-query.scw
PDB file :
Tito_Scwrl_2W6R.pdb
: