Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPYSSKVQSLSESATIAISTLAKELKSQGKDILSFSAGEPDFDTPQAIKDAAIKALND-GFTKYTPVAGIPELLKAIAFKLKKENNLDYE--PSEILVSNGAKQSLFNAIQALIGEGDEVVIPVPFWVTYPELVKYSGGVSQFIQTDEK---------SHFKITPKQLKDALSPKTKMLILTTPSNPTGMLYSKAELEALGEVLKDTKVWVLSDEIYEKLVYKG-EFVSCAAVSEEMKKRTITINGLSKSVAMTGWRMGYAASKDKKLVKLMSNLQSQCTSNINSITQMASIVALE-------GLVDKEIETMRQAFEKRCHLAHAKINAIEGLNALKPDGAFYLFINIGSLCG---------GDSMRFCHELLEKEGVALVPGKAFGL-------EGYVRLSFACSEEQIEKGIERIARFVKSKG |
| 3E2Y Chain:A ((12-409)) | -----------------VWVEFTKLA-ADPSVVNLGQGFPDISPPSYVKEELSKAAFIDNMNQYTRGFGHPALVKALSCLYGKIYQRQIDPNE-EILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIAT-LPGMWERTITIGSAGKTFSVTGWKLGWSIGPA-HLIKHLQTVQQNSFYTCATPLQAALAEAFWIDIKRMDDP-ECYFNSLPKELEVKRDRMVRLLNSV-GLKPIVPDGGYFIIADVSSLGADLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKSKPHFEKLVRFCFIKKDSTLDAAEEIFRAWN---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3E2Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -194141 for 3139 contacts (-61.8/contact) +
2D Compatibility (PS) -40494 + (NN) -23646 + (LL) 2008
1D Compatibility (HY) -28800 + (ID) 5350
Total energy: -290423.0 ( -92.52 by residue)
QMean score : 0.530
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