Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
------------MKKCEKRVFDSLPSTQTYLLEKLKSNKLKAPVLVLAKNQSAGIGSRGNIWEIVESALTFSLALNASDLPKDLPMQASALYLGFLFKEVLKELG-SQTWLKWPNDLYLGDQKIGGVMVNVYKGMR-VCGIGVNRVSTKWACLDIGASDDWIIESFLKKIEENLFWGEVLSKYALEFHRSNSFNFHNDWGEAVSLKDAELLEDGRICIKGKIYDRM
1BIA Chain:? ((64-270))
IQLLNAKQILGQLDGGSVAVLPVIDSTNQYLLDRIGELK--SGDACIAEYQQAGSPFGA--------NLYLSMFWRL---EQPAAAIGLSLVIGIVMAEVLRKLGADKVRVKWPNDLYLQDRKLAGILVELTGAAQIVIGAGIN------------MAMWITLQEAGINLDRNTLAAMLIRELRAALELFEQEGLAPYLSRWEKLDNFINRPVKLIIGDKEIFGIS
General information:
TITO was launched using:
RESULT:
Template:
1BIA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -80047 for 1317 contacts (-60.8/contact) +
2D Compatibility (PS) -18157 + (NN) -9850 + (LL) 2036
1D Compatibility (HY) -11600 + (ID) 1900
Total energy: -119518.0 ( -90.75 by residue)
QMean score : 0.406
(partial model without unconserved sides chains):
PDB file :
Tito_1BIA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BIA-query.scw
PDB file :
Tito_Scwrl_1BIA.pdb
: