Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRTIDSSSKKDGFRMPGEFEKHAGCYIIWPERPDNWRLGAKPAQKAFVDVATAISHFEPVTVVASSSQYV--NARYMLSDEIRVVEMDNDDAWVRDSGPTFVVNDSGDVRGVDWSFNSWGGLVDGLYFPWDKDDQVAQKICELER---KDRYRLADFVLEGGSIHVDGEGTLVTTEECLLSEGRNPQLSKQQIEMVLKEYLNLEKIIWLKRG-IYLDETNGHVDNIFNYVRPGVVALAWTDDETDPQYEISKECFDILSNETDAKGRKLEVHKINVPKPILITDEESKGVDAVEGTLPREEGDRLAASYINYYTANGGVIFPLFGDPNDELAREKLQQLYPNCEVVGVKAREILLGGGNIHCITQQVPR |
| 3HVM Chain:A ((1-330)) | -----------MKRMLAEFEKIQAILMAFPHEFSDWAYCIKEARESFLNIIQTIAKHAKVLVCVHTNDTIGYEML-KNLPGVEIAKVDTNDTWARDFGAISIENH-GVLECLDFGFNGWGLKY-----PSNLDNQVNFKLKS-LGFLKHPLK-TMPYVLEGGSIESDGAGSILTNTQCLLEKNRNPHLNQNGIETMLKKELGAKQVLWYSYGYLKGDDTDSHTDTLARFLDKDTIVYSACEDKNDEHYTALKKMQEELKTFKKLDKTPYKLIPLEIPKAIFD-----------------ENQQRLPATYVNFLLCNDALIVPTYNDPKDALILETLKQHTP-LEVIGVDCNTLIKQHGSLHCVTMQLY- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HVM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -144041 for 2807 contacts (-51.3/contact) +
2D Compatibility (PS) -35755 + (NN) -18107 + (LL) 1588
1D Compatibility (HY) -20000 + (ID) 4750
Total energy: -221065.0 ( -78.75 by residue)
QMean score : 0.476
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