Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LSIQIFNTLKREKQPFKPLKDGEVKMYVCGPTVYNYIHIGNARPIIVFDTVRRYFTYRGYDVKFVSNFTDVDDKLIR------------------------------------------------AANE------LK-----LTVPEVADRFIGAYFDDVDQLNVAKASVNPRVTENM-DEIIQMISTLIEKGYAYESAGDVYFQTKKFKDYGKLSGQELSELQHGARVEYNERKQDELDFTLWKAAKPGEIFWESPFGNGRPGWHIECSALAKKY--LGDTIDIHAGGQDLVFPHHEDEIAQSEAATGKTFANYWMHNAFLNIDGEKMSKSLGNFITLHDVLKD----------------------------NDPNVIRFFMLSVHYRKPITLNDAILEDAK-NGLERLMIAYQNIDHRIQTDDGEY----------V-EEAHEDEWLEQLTELKQAFEDDMDDDFNTANAITTFHELAKRANIYLAKETVS----------INVLREFLSMMRLFAEVLGLKLENTQTDSLDDSEVEALIEERLQARNERNFARADEIRDILKEKNIILEDTAQGTRFRRG |
| 1F7U Chain:A ((141-604)) | -------------------ENKKVIIEFSSPNIAKPFHAGHLRSTIIGGFLANLYEKLGWEVIRMNYLGDWGKQFGLLAVGFERYGNEEALVKDPIHHLFDVYVRINKDIEEEGDSIPLEQSTNGKAREYFKRMEDGDEEALKIWKRFREFSIEKYIDTYARLNIKYDV-YSGESQVSKESMLKAIDLFKEKGLTHEDKGAVLIDLTKF---NKK----------------------LGKAIVQKSD--GTTLYLTR----------DVGAAMDRYEKYHFDKMIYVIASQQDL-H-AAQFFEILKQMGFEWAKDLQHVNFGMVQ--GMSTRKGTVVFLDNILEETKEKMHEVMKKNENKYAQIEHPEEVADLVGISAVMIQDMQGKRINNYEFKWERMLSFEGDTGPYLQYAHSRLRSVERNASGITQEKWINADFSLLKEPAAKLLIRLLGQYPDVLRNAI-KTHEPTTVVTYLFKLTHQVSSCYDVLWVAGQTEELATARLALYGAARQVLYNGMRLLGLTPV--------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1F7U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -146571 for 2733 contacts (-53.6/contact) +
2D Compatibility (PS) -37798 + (NN) -10710 + (LL) 6892
1D Compatibility (HY) -13200 + (ID) 2600
Total energy: -203987.0 ( -74.64 by residue)
QMean score : 0.351
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