Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSVLNIEGAKLSYQKVGQ--GPILIFIPGANGTGDIFLPLAEQLKTSFSVVMVDRRGYGDSELTAAIPERASHAYDDYRVTRDAADIAALAKALSDVPVYILGSSSGSIVAMHVLKNHPEVVKKIAFHEPPINTFLPDSEMWQEANEKIVQTALTKNMAEAMQLFGETLHIAPIDAESMSKPAVTIDEVT-KDSTTQQMKYWFTYEIRQYTSSNIS-LDDFKPYVHQITLLNGTDSKGSFPQDVNAFIAK-QLGLTIVDIPGGHLGYIQKPAGFAKVLLSIWG |
| 3OM8 Chain:A ((10-265)) | ---ATSDGASLAYRLDGAAEKPLLALSNSIGTTLHMWDAQLPALTRHFRVLRYDARGHGASSVP----------PGPYTLARLGEDVLELLDALEVRRAHFLGLSLGGIVGQWLALHAPQRIERLVLANTSAWLGPA--AQWDE---RIAAVLQAEDMSETAAGFLGNWFPPALLER-AEPVV-----ERFRAMLMATNRHGLAGSFAAV--RDTDLRAQLARIERPTLVIAGAYDTVTA-ASHGELIAASIAGARLVTLPAVHLSNVEFPQAFEGAVLSFLG |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3OM8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -118063 for 2204 contacts (-53.6/contact) +
2D Compatibility (PS) -27070 + (NN) -15293 + (LL) 1628
1D Compatibility (HY) -4000 + (ID) 2400
Total energy: -165198.0 ( -74.95 by residue)
QMean score : 0.403
|
|
|