Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VKQAIGFIDSGVGGLTVVREVLKQLPHEQVYYLGDTARCPYGPRDKEEVAKFTWEMTNFLVDRGIKMLVIACNTATAAALYDIREKLDIPVIGVIQPGSRAALKATRNNKIGVLGTLGTVESMAYPTALKGLNRRVEVDSLACPKFVSVVESGEYKSAIAKKVVAESLLPLKSTKIDTVILGCTHYPLLKPIIENFMGDGVAVINSGEETASEVSALLDYHNLLDATDEEIEHRFFTTGSTQIFKDIAKDWLNMPDMTVEHIKLGK
1B74 Chain:A ((1-252))
--MKIGIFDSGVGGLTVLKAIRNRYRKVDIVYLGDTARVPYGIRSKDTIIRYSLECAGFLKDKGVDIIVVACNTASAYALERLKKEINVPVFGVIEPGVKEALKKSRNKKIGVIGTPATVKSGAYQRKLEEGG--ADVFAKACPLFAPLAEEGLLEGEITRKVVEHYLKEFKG-KIDTLILGCTHYPLLKKEIKKFLGD-AEVVDSSEALSLSLHNFIK-------DDGSSSLELFFTDLSPNLQFLIKLILG-RDYPVKLAEGVF
General information:
TITO was launched using:
RESULT:
Template:
1B74.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -187407 for 2169 contacts (-86.4/contact) +
2D Compatibility (PS) -26353 + (NN) -2776 + (LL) 1020
1D Compatibility (HY) -23600 + (ID) 5150
Total energy: -244266.0 ( -112.62 by residue)
QMean score : 0.471
(partial model without unconserved sides chains):
PDB file :
Tito_1B74.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B74-query.scw
PDB file :
Tito_Scwrl_1B74.pdb
: