Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFKKLFRQDENILNSELAEDLPIPRHVAIIMDGNGRWAKKRFLPRIAGHKEGMDVVKRVTRYANAIGIDVLTLYAFSTENWKRPTDEVDFLMKLPVEFFDSFVPELIEENVRVNVMGYRENLPDHTMRAVEKAIADTAHCTGLTLNFALNYGGRSEIITAAKEAMKELELEGKSADDLTEEKLNDHLMSSGLGDPDLLIRTSGELRLSNFMLWQLAYSEFYFTDTHWPDFSKEDFLQAIIEYQNRSRRFGGL
1F75 Chain:A ((14-242))
----------------NINAAQIPKHIAIIMDGNGRWAKQKKMPRIKGHYEGMQTVRKITRYASDLGVKYLTLYAF------------NYLMKLPGDFLNTFLPELIEKNVKVETIGFIDDLPDHTKKAVLEAKEKTKHNTGLTLVFALNYGGRKEIISAVQLIAERYKSGEISLDEISETHFNEYLFTANMPDPELLIRTSGEERLSNFLIWQCSYSEFVFIDEFWPDFNEESLAQCISIYQNR-------
General information:
TITO was launched using:
RESULT:
Template:
1F75.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -109556 for 1664 contacts (-65.8/contact) +
2D Compatibility (PS) -23501 + (NN) -7488 + (LL) 1956
1D Compatibility (HY) -20800 + (ID) 5850
Total energy: -165239.0 ( -99.30 by residue)
QMean score : 0.528
(partial model without unconserved sides chains):
PDB file :
Tito_1F75.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1F75-query.scw
PDB file :
Tito_Scwrl_1F75.pdb
: