Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LTKLKKVMISVIAATLLLLAGCGSSAVIKTDAGSVTQDELYEAMKTT------------YGNEVVQQLTFKKILEDKY-----TVTEKEVNAEYKKYEEQYGDSFESTLSSNNLTKTSFKENLEYNLLVQKATEANMDVSESKLKAYYKTWEP------DITVRHILVDDEATAKEIQTKLKN------GEKFTDLAKEYSTDTATSTNGGLLDPFGPGEMDETFEKAAYALENKDDVS-GIVKSTYGYHLIQLVKKTE--KGTYAKEKANVKAAYIKSQLTSENMTAALKKELKAANIDIKDSDLKDAFADYTSTSSTSSTTTSN |
| 3RFW Chain:A ((22-273)) | ------------------------ATVATVNGKSISDTEVSEFFAPMLRGQDFKTLPDNQKKALIQQYIMQDLILQDAKKQNLEKDP-LYTKELD----------------------RAKDAILVNVYQEKIL-NTIKIDAAKVKAFYDQNKDKYVKPARVQAKHILVATEKEAKDIINELKGLKGKELDAKFSELAKEKSIDPGSKNQGGELGWFDQSTMVKPFTDAAFALK-NGTITTTPVKTNFGYHVILKENSQAKGQIKFDEVKQGIENGLKFEEFK-KVINQKGQDLLNSAKVEYK------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RFW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -35376 for 1307 contacts (-27.1/contact) +
2D Compatibility (PS) -24056 + (NN) -14066 + (LL) 3848
1D Compatibility (HY) -13200 + (ID) 2600
Total energy: -85450.0 ( -65.38 by residue)
QMean score : 0.671
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