Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LTEEVRCIGCGAVIQTEDPDKIGYAPKSSLNNEQVICKRCFRLKHYNEIQDVALTDDDFLRILNQISSKQALIVYVVDIFDFDGSWL--PGLPRFA--GSNPVLLVGNKEDVLPKSLKRDKLTRWMRTRAKEQGLAATDVVLVSAEKGHGFDTLLEKIDELRNGQDVYVVGCTNVGKSTLINRIIKQASGENNVITTSQFPGTTLDKIEIPLADGNVLVDTPGIINHHQMAHFIDTTTLKAITPKKEVKPAVFQLNEEQTLFLGALARLDYVSGGRKSLVVYVSNNLPIHRTKLEKAEALYEKQAGLVLQPPTEEDMKTLPKLVPYSFTVKEKADIVFSGLGWVTIPEGGAKVTAWVPEGVSATIRTSLV |
| 2RCN Chain:A ((128-281)) | ------------------------------------------------------------------AANIDQIV-IVSAILPELSLNIIDRYLVGCETLQVEPLIVLNKIDLLDDEG-MDFVNEQMDIYR-NI---GYRVLMVSSHTQDGLKPLEEALT----GRISIFAGQSGVGKSSLLNALLGLQNEI-LTN---------TAARLYHFPHGGDVIDSPGVREF----------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2RCN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -69607 for 996 contacts (-69.9/contact) +
2D Compatibility (PS) -15217 + (NN) -5837 + (LL) 15932
1D Compatibility (HY) -6000 + (ID) 1500
Total energy: -82229.0 ( -82.56 by residue)
QMean score : 0.509
|
|
|