Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQKTVKKVDEAFNFMREVASDNGTILFVGTKKQAQESVRDEAIRSGQYFVNHRWLGGTLTNFETIQKRIQHLKKIERMEADGTFEVLPKKEVVLLKKEQEKLERFLGGIKDMKGLPDALFIVDPRKERIAVAEARKLHIPIIGIVDTNCDPDEIDYVIPANDDAIRAVKLLTAKMADAIIEVNQGEELTEAEVAPVEEKATEETTEA
4TOI Chain:A ((5-240))
-ATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKIASRKGKILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQSQDGTFDKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVFAIVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAVAATVREGRSQDLASQAE---------------
General information:
TITO was launched using:
RESULT:
Template:
4TOI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -111463 for 1885 contacts (-59.1/contact) +
2D Compatibility (PS) -26203 + (NN) -20115 + (LL) 1624
1D Compatibility (HY) -22400 + (ID) 6250
Total energy: -184807.0 ( -98.04 by residue)
QMean score : 0.700
(partial model without unconserved sides chains):
PDB file :
Tito_4TOI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4TOI-query.scw
PDB file :
Tito_Scwrl_4TOI.pdb
: