Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ---MNLRGILPFAHDTLRKV-VRSGDYVVDATCGNGHDTLLLAELVGINGHVLGFDIQQLAIDATNTRLENAGVSSQVELVCASHARIPEYTSKPVRAAIFNLGYLPGGDKEITTTADSTLESIGHLMELLEVGGVIILVIYHGHPAGKQEKD---------AVMTFCEAIPQQDFHVLSYNFINQKNDAPFVIIIEKRKPRQS------------------------------------------------------- |
1RI5 Chain:A ((41-292)) | SKTINIRNANNFIKACLIRLYTKRGDSVLDLGCGKGGDLLKYERAGI--GEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKE-----FDVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSRDVILERYKQGRMSNDFYKIELEKMEDVPMESVREYRFTLLDSVNNCIEYFVDFTRMVDGFKRLGLSLVERKGFIDFYEDEGRRNPELSKKMGLGCLTREESEVVGIYEVVVFRKL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RI5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -58856 for 1349 contacts (-43.6/contact) +
2D Compatibility (PS) -20444 + (NN) -7238 + (LL) 908
1D Compatibility (HY) -4000 + (ID) 1700
Total energy: -91330.0 ( -67.70 by residue)
QMean score : 0.346
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