Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LKRKVGIIGTGHVGSDVAFSLVTQGICDEIVLIDKIETKAESEALELRDMASMTNSYTMITSNDWSALGDADVIVMAVGPETLLREDRMEELVETSRSVAEIVPKIIASGFQGIFVNITNPCDVITMLIQKLSGFDHSRVFGTGTSLDTARMRRVVGEALHINPKSVEGYVLGEHGESQFVAWSTVKIGGVSIKDY-----KTTTSLDLPALKDAVRGGGWNILTGKGWTSFGIATAVAGIVDAILTDAKQVFPLAVFSEKTS----TYIGQPALIGANGVIDILEPPLTETEKINFNESAEIIKNAFQLI |
2XXJ Chain:B ((2-304)) | ---KVGIVGSGMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHP-VWVWAGSYGDLEGARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATNPVDVMTQVAYALSGLPPGRVVGSGTILDTARFRALLAEYLRVAPQSVHAYVLGEHGDSEVLVWSSAQVGGVPLLEFAEARGRALSPEDRARIDEGVRRAAYRIIEGKGATYYGIGAGLARLVRAILTDEKGVYTVSAFTPEVAGVLEVSLSLPRILGAGGVAGTVYPSLSPEERAALRRSAEILKEA---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2XXJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -196630 for 2667 contacts (-73.7/contact) +
2D Compatibility (PS) -30832 + (NN) -2442 + (LL) 1064
1D Compatibility (HY) -22400 + (ID) 5050
Total energy: -256290.0 ( -96.10 by residue)
QMean score : 0.576
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