Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNRLAVEIPGLSLKNPIMPASGCFGFGQEYSKYYDLNELGAIMAKAVTPEPRLGNPTPRVAETASGMLNAIGLQNPGLEHVLAHELPFLEQF--ETPIIANVAGATEDDYVQVCARIGESKAVKAIELNISCPNVKHGGIAFGTDPEVAHRLTKAVKNVASVPVYVKLSPNV--ADIVSIAQAIEAAGADGLTMINTLLG-MRIDLKTRKPII--ANGTGGLSGPAIKPVAIRMIHQVRAV--SNIPIIGMGGVQTVDDVLEFLIAGADAVAV-GTMNFTDPFICPKLISELPKRMDALGISSLQDLKKERTNQ |
| 2DOR Chain:A ((1-311)) | --MLNTTFANAKFANPFMNASGVHCMTIEDLEELKASQAGAYITKSSTLEKREGNPLPRYVDLELGSINSMGLPNLGFDYYLDYVLKNQKENAQEGPIFFSIAGMSAAENIAMLKKIQESDFSGITELNLSCPNVP-GKPQLAYDFEATEKLLKEVFTFFTKPLGVKLPPYFDLVHFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRLKPEIQIIGTGGIETGQDAFEHLLCGATMLQIGTALHKEGPAIFDRIIKELEEIMNQKGYQSIADFHGKLKSL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DOR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -177391 for 2584 contacts (-68.6/contact) +
2D Compatibility (PS) -32484 + (NN) -15556 + (LL) 172
1D Compatibility (HY) -14800 + (ID) 4400
Total energy: -244459.0 ( -94.60 by residue)
QMean score : 0.485
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