Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKSALELKNVSFSRKRDFEMKNVSASIPEGKITTLIGPNGSGKSTMLRLMMRLLTPDSGEILLNEKNITEIPSKD--LAKKMTMLSQAPEG-LVDVMVHDLVAYGRLPHRSWLSTLQEEDEAVIHWAIKVCNLEELAYRPLHSLSGGERQRAWLAMALAQKTPILLLDEPTTYLDIAHQLELLDLLVHLNKEYNLTIVLVLHDLNQAAIYSDHVFVCENGQLVKDGSPREVFTTELLRDVFHITADITEKDGKQHIHPLASTRFEY
4HLU Chain:C ((12-200))
----IELNSVSFRYNGDYVLKDVNAEFETGKIYVVVGKNGSGKTTLLKILAGLLAA-AGEIFLDGS-----PADPFLLRKNVGYVFQNPSSQIIGATVEEDVAF----SLEIMGLDESEMRKRIKKVLELVGLSGLAAADPLNLSGGQKQRLAIASMLARDTRFLALDEPVSMLDPPSQREIFQVLESLKNE-GKGIILVTHEL--------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4HLU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -129748 for 1419 contacts (-91.4/contact) +
2D Compatibility (PS) -20436 + (NN) -12406 + (LL) 5064
1D Compatibility (HY) -15200 + (ID) 3300
Total energy: -176026.0 ( -124.05 by residue)
QMean score : 0.501
(partial model without unconserved sides chains):
PDB file :
Tito_4HLU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HLU-query.scw
PDB file :
Tito_Scwrl_4HLU.pdb
: