Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKEKFDRSKPHVNIGTIGHVDHGKTTLTAAITTVLAKKGY--------ADAQAYDQ----------IDGAPEERERGITISTAHVEYQTDSRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMP-------QTREHILLSRQVGVPYIVVFMNKCDMVD---DEELLELVEMEIRDLLTEYEFPGDDIPVIKGSALKA-----LQGEADWEAKIDELMEAVDSYIPTPERDTDKPFMMPVEDVFSITGRGTVATGRVERGQVKVGDEVEVI--GIEEESKKVVVTGVEMFRKLLDYAEAGDNIGALLRGVAREDIQRGQV---LAKPGSITPHTNFKAETYVLTKEEGGR--HTPFFNNYRPQFYFRTTDV-------TGIVTLPEGTEMVMPGDNIELAVELIAPIAIEDGT------KFSIREGGRTVGAGVVSNISK |
| 3VMF Chain:A ((7-430)) | ---------KPHMNLVVIGHVDHGKSTLVGHL---LYRLGYIEEKKLKELEEQAKSRGKESFKFAWILDKMKEERERGITIDLTFMKFETKKYVFTIIDAPGHRDFVKNMITGASQADAAILVVSARKGEFEAGMSTEGQTREHLLLARTMGIEQIIVAVNKMDAPDVNYDQKRYEFVVSVLKKFMKGLGYQVDKIPFIPVSAWKGDNLIERSPNMPWYNG-PTLVEALDQLQP-PAKPVDKPLRIPVQNVYSIPGAGTVPVGRVETGVLRVGDKVVFMPPGVVGE-----VRSIEMHYQQLQQAEPGDNIGFAVRGVSKSDIKRGDVAGHLDKPPTVA--EEFEARIFVIWHPSAITVGYTPVIHVHTASVSSRIIEIKAKLDPKTGQV-VEQNPQFLKAGDAAIVRFKPVKPLVVEKFSEIPQLGRFAMRDMNRTVGIGIVTDV-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VMF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -120717 for 3030 contacts (-39.8/contact) +
2D Compatibility (PS) -39947 + (NN) -15728 + (LL) 1740
1D Compatibility (HY) -30400 + (ID) 7550
Total energy: -212602.0 ( -70.17 by residue)
QMean score : 0.414
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