Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKEFKQISRFFWHYLRGYKPQLFVILIAVVFATYLQVKAPQYIGNAVQELGDYVVNLMQTGVDDKSDFIHIIWMLILCYVLLAAATFIQSIIMTGVAGKSTNRMRIGLFRKMEKLSIRFFDSRNDGEMLSRFTSDLDNISNTLNQALIQVLSNVALMIGVIIMMFQQNVELAFVTLISAPFAIIIATVIIRKARKFVDVQQDELGVLNGYIDEKISGQKIIITNGLEEETIDGFVKQNNIVKNATYKGQVYSGLLFPMMQGISLLNTAIVIFFGGWLALNGDLERTAALGLIVMFVQYSQQFYMPLTQISSQYSLLQLAITGARRVSEVFAEEEEVERENLQTIDGINKGVKLDHVDFAYDPAKP---VLKDVSIDVSKGKMVALVGPTGSGKTTVMNLLNRFYNVDGGAILFDDIDIRDIRLDSLRKQVGIVLQDSVLFTGTIRDNIVFGKPEASDDEVINA-AKQANIHDFIMNLEKGYETEISDENNIFSVGQKQLMSIARTIITNPSLLILDEATSNVDTVTESRIQKAM--DNVISGRTSFVIAHRLKTILDADHIVVLHQGEVIEQGNHDELMKAEGFYSELYHNQFVIE |
2IXG Chain:A ((17-253)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VKFQDVSFAY-PNHPNVQVLQGLTFTLYPGKVTALVGPNGSGKSTVAALLQNLYQPTGGKVLLDGEPLVQYDHHYLHTQVAAVGQEPLLFGRSFRENIAYGLTRTPTMEEITAVAMESGAHDFISGFPQGYDTEVGETGNQLAVGQRQAVALARALIRKPRLLILDNATSALDAGNQLRVQRLLYESPEWASRTVLLITQQLSLAERAHHILFLKEGSVCEQGTHLQLMERGGCYRSM-------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2IXG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -146713 for 1860 contacts (-78.9/contact) +
2D Compatibility (PS) -25058 + (NN) -6709 + (LL) 31616
1D Compatibility (HY) -20000 + (ID) 4550
Total energy: -171414.0 ( -92.16 by residue)
QMean score : 0.508
|
|
|