Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEITIVKGDITEQEVDVIVNAANSGLLGG-GGVDGAIHQAAGPDLLKECQEVINRIGSCPAGEAVITSAGDLKATYIIHAVGPIWKDGEHQEANKLASCYWKALDLAAGKDLTSIAFPNISTGVYGFPKKLAAEVALYTVRKWAEEEYDTSIKEIRFVCFD--EENLKLYNKLINSEVV
3Q71 Chain:A ((40-215))
-QMLLVKEGVQNAKTDVVVNSVPLDLVLSRGPLSKSLLEKAGPELQEELDTVGQ-GVAVSMGTVLKTSSWNLDCRYVLHVVAPEWRNGSTSSLKIMEDIIRECMEITESLSLKSIAFPAIGTGNLGFPKNIFAELIISEVFKFSSKNQLKTLQEVHFLLHPSDHENIQAFSDEFARRA-
General information:
TITO was launched using:
RESULT:
Template:
3Q71.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -111838 for 1398 contacts (-80.0/contact) +
2D Compatibility (PS) -19587 + (NN) -16689 + (LL) 500
1D Compatibility (HY) -12800 + (ID) 2250
Total energy: -162664.0 ( -116.35 by residue)
QMean score : 0.624
(partial model without unconserved sides chains):
PDB file :
Tito_3Q71.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3Q71-query.scw
PDB file :
Tito_Scwrl_3Q71.pdb
: