Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVMTDPIADFLTRIRNANQAKHEVLEVPASNIKKGIADILKREGFVKNVEVIEDDKQGIIRVFLKYGQNGERVITNLKRISKPGLRVYTKHEDMPKVLNGLGIAIVSTSEGLLTDKEARQKNVGGEVLAYIW
1S03 Chain:G ((4-128))
----DPIADMLTRIRNGQAANKAAVTMPSSKLKVAIANVLKEEGFIEDFKV-EGDTKPELELTLKYFQ-GKAVVESIQRVSRPGLRIYKRKDELPKVMAGLGIAVVSTSKGVMTDRAARQAGLGGEIICYVA
General information:
TITO was launched using:
RESULT:
Template:
1S03.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69396 for 905 contacts (-76.7/contact) +
2D Compatibility (PS) -13243 + (NN) -2258 + (LL) 784
1D Compatibility (HY) -14400 + (ID) 3000
Total energy: -101513.0 ( -112.17 by residue)
QMean score : 0.623
(partial model without unconserved sides chains):
PDB file :
Tito_1S03.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1S03-query.scw
PDB file :
Tito_Scwrl_1S03.pdb
: