Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKIVVVGTNHAGTAAIKTMLSNYGEANEIVTFDQNSNISFLGCGMALWIGEQIDGPEGLFYSDKEQ-LESMGAKVYMNSPVLNIDYDKKEVTALVD--GKEHVESYEKLILATGSQPIIPPIKGVEIQEGSREFKATLENLQFVKLYQNSEEVIEKLA-KPGINRVAVVGAGYIGVELAEAFQRIGKEVTLVDVADTCMGGYYDRDFTDMMSKNLEDHGIRLAFGQAVQAVEGDGKVERL-VTDKETFDVDMVILAVGFRPNTELGAG-KLDTFRNGAWVVDKKQETSVKDVYAIGDCATIWDNSRDDINYIALASNAVRTGIVAAHNACGTE-LEGAGVQGSNGISIYGLNMVSTGLTLEKAKQAGYNAVETGFNDLQKPEFIKHNNHEVAIKIVYDKDSRVILGCQMVSHEDVSM-GIHMFSLAIQEKVTIEKLALTDIFFLPHFNKPYNYITMAALGAKD |
3ICS Chain:A ((36-480)) | SRKIVVVGGVAGGASVAARLRRLSE-EDEIIMVERGEYISFANCGLPYYIGGVITERQKLLVQTVERMSKRFNLDIRVLSEVVKINKEEKTITIKNVTTNETYNEAYDVLILSPGAKPIVPSIPGIEE------A----KALFTLRNVPDTDR-IKAYIDEKKPRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMPP-IDYEMAAYVHEHMKNHDVELVFEDGVDALEENG-A-VVRLKSGSVIQTDMLILAIGVQPESSLAKGAGLALGVRGTIKVNEKFQTSDPHIYAIGDAIEVKDFVTETETMIPLAWPANRQGRMLADIIHGHTDSLYKGTLGTSVAKVFDLTVATTGLNEKILKRLNIPYEVVHVQANSHAGYYPNA-TPVLIKLIFNKDSGKIYGAQTLGR-DGVDKRMDVIATAIKANLTVLDLPDLELSYAPPYSSAKDPVNMVGYAASN |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ICS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -291865 for 3819 contacts (-76.4/contact) +
2D Compatibility (PS) -47660 + (NN) -14111 + (LL) 1244
1D Compatibility (HY) -26400 + (ID) 5750
Total energy: -384542.0 ( -100.69 by residue)
QMean score : 0.493
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