Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTVNLDWDNLGFAYRKLPFRYISHFKDGKWDDGKLTDDATLHISESSPALHYGQQAFEGLKAYRTKDGSIQLFRPDQNAERLQRTADRLLMPHV-PTDKFIAAVKSVVRANEEFVPPYGTGATLYIRPLLIGVGDIIGVKPA--EEYIFTVFAMPVGSYFK--GGLTPTNFIVSKEYDRAAPN-GTGAAKVGGNYAASLLPGKYAHEKQFSDVIYLDPATHTKIEEVGAANFFGITKDNQFITPL-SPSILPSITKYSLLYLAKERFGMEAIEGDVFVDELDKFTEAGACGTAAVISPIGGIQNGDDFHVFYSETEVGPATRKLYDELVGIQFGDVEAPEGWIYKVD |
| 1IYE Chain:A ((8-308)) | ---------------------------YIWFNGEMVRWEDAKVHVMSHALHYGTSVFEGIRCYDSHKG-PVVFRHREHMQRLHDSAKIYRFPVSQSIDELMEACRDVIRKNN--------LTSAYIRPLIFVGDVGMGVNPPAGYSTDVIIAAFPWGAYLGAEALEQGIDAMVSS-WNRAAPNTIPTAAKAGGNYLSSLLVGSEARRHGYQEGIALDVN--GYISEGAGENLFEVKDGV-LFTPPFTSSALPGITRDAIIKLAKELGI-EVREQVLSRESLYLADEVFMSGTAAEITPVRSVDGI---QV-GE-GRCGPVTKRIQQAFFGLFTGETEDKWGWLDQVN |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IYE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -109874 for 2470 contacts (-44.5/contact) +
2D Compatibility (PS) -31615 + (NN) -11371 + (LL) 2544
1D Compatibility (HY) -12800 + (ID) 4650
Total energy: -167766.0 ( -67.92 by residue)
QMean score : 0.433
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