Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIGIIAAMEEELKLLVENLEDKSQETVLS-NVYYSGRYGEHELVLVQSGVGKVMSAMSVAILVESFKVDAIINTGSAGAVATGLNVGDVVVADTLVYHDVDLTAFGYDYGQMSMQPLYFHSDKTFVSTFEAVLSKEEMTSKVGLIATGDSFIAGQEKIDVIKGHFPQVLAVEMEGAAIAQAAQATGKPFVVVRAMSDTAAHDANITFDEFIIEAGKRSAQVLMAFLKAL
4OY3 Chain:A ((4-227))
-KIGILGAMREEITPILELFGVDFEEIPLGGNVFHKGVYHNKEIIVAYSKIGKVHSTLTTTSMILAFGVQKVLFSGVAGSLVKDLKINDLLVATQLVQHDVDLSAFDHPLGFIPESAIFIETSGSLNALAKKIANEQHIALKEGVIASGDQFVHSKERKEFLVSEF-KASAVEMEGASVAFVCQKFGVPCCVLRSISNNADEKAGMSFDEFL----EKSAHTSAKFLKSM
General information:
TITO was launched using:
RESULT:
Template:
4OY3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -164757 for 1991 contacts (-82.8/contact) +
2D Compatibility (PS) -23864 + (NN) -7014 + (LL) 348
1D Compatibility (HY) -18000 + (ID) 3700
Total energy: -216987.0 ( -108.98 by residue)
QMean score : 0.526
(partial model without unconserved sides chains):
PDB file :
Tito_4OY3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4OY3-query.scw
PDB file :
Tito_Scwrl_4OY3.pdb
: