Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDSRPIGFLDSGVGGLTVVKEMFRQLPEEEVIFIGDQARAPYGPRPAQQIREFTWQMVNFLLTKNVKMIVIACNTATAVAWQEIKEKLDIPVLGVILPGASAAIKSTNSGKVGIIGTPMTVKSDAYRQKIQALSPNTAVVSLACPKFVPIVESNQMSSSLAKKVVYETLSPLVGKLDTLILGCTHYPLLRPIIQNVMGAEVKLIDSGAETVRDISVLLNYFEINHNWQNKHGGHHFYTTASPKGFKEIAEQWLSQEINVERI--VL
1B74 Chain:A ((1-252))
---MKIGIFDSGVGGLTVLKAIRNRYRKVDIVYLGDTARVPYGIRSKDTIIRYSLECAGFLKDKGVDIIVVACNTASAYALERLKKEINVPVFGVIEPGVKEALKKSRNKKIGVIGTPATVKSGAYQRKLE--EGGADVFAKACPLFAPLAEEGLLEGEITRKVVEHYLKEFKGKIDTLILGCTHYPLLKKEIKKFLG-DAEVVDSSEALSLSLHNFIK--------DDGSSSLELFFTDLSPNLQFLIKLILGRDYPVKLAEGVF
General information:
TITO was launched using:
RESULT:
Template:
1B74.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -211253 for 2151 contacts (-98.2/contact) +
2D Compatibility (PS) -26798 + (NN) -8187 + (LL) 1140
1D Compatibility (HY) -25600 + (ID) 4550
Total energy: -275248.0 ( -127.96 by residue)
QMean score : 0.563
(partial model without unconserved sides chains):
PDB file :
Tito_1B74.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B74-query.scw
PDB file :
Tito_Scwrl_1B74.pdb
: