Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKTYHFIGIKGSGMSALALMLHQMGHNVQGSDVDKY---YFTQRGLEQAGVTIL-PFSP-NNI-SEDLEIIAGNAFRPDNNEELAYVIEKGYHFKRYHEFLGDFMRQFTSLGVAGAHGKTSTTGLLAHVLKNITDTSFLIGDGTGRGS------ANANYFVFEADEYER-HFMPYHPEYSIITNIDFDHPDYFTGLEDVFNAFNDYAKQVQ--KGLFIYGEDSKLHEITSK--APIYYYGFEDSND-FIAKDITRTVNGSDFKVFYNQEE-IGQFHVPAYGKHNILNATAVIANLYIMGIDMALVAEHLKTFSGVKRRFTEKIID-DTVIIDDFAHHPTEIIATLDAARQKYPSKEIVAIFQPHTFTRTIALLDDFAHALSQADSVYLAQIYGSAREVDNGEVKVEDLAAKIVKHSDLVTVENVSPLLNHDNAVYVFMGAGDIQLYERSFEELLANLTKNTQ |
| 3LK7 Chain:A ((8-436)) | ENKKVLVLGLARSGE-AAARLLAKLGAIVTVNDGKPFDENPTA-QSLLEEGIKVVCGSHPLELLDEDFCYMIKNPGIP-YNNPMVKKALEKQIPVLTEVELAYLV-SESQLIGITGSNGKTTTTTMIAEVLNAGGQRGLLAGNIGFPASEVVQAANDKDTLVMELSSFQLMGVKEFRPHIAVITNLMPTHLDYHGSFEDYVAAKWNIQNQMSSSDFLVLNFNQGISKELAKTTKATIVPFSTTEKVDGAYVQD---------KQLFYKGENIMSVDDIGVPGSHNVENALATIAVAKLAGISNQVIRETLSNFGGVKHRLQSLGKVHGISFYNDS--KSTNILATQKALSGF-DNTKVILIAGGL--DRGNEFDE-LIPDITGLKHMVVLGESASRVK----RAAQKA-GVTYSDALDVRDAVHKAYEVAQQGDVILLSPANASWDMYKNFEVRGDEFIDTFE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LK7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -184235 for 3594 contacts (-51.3/contact) +
2D Compatibility (PS) -43974 + (NN) -18832 + (LL) 832
1D Compatibility (HY) -15600 + (ID) 4250
Total energy: -266059.0 ( -74.03 by residue)
QMean score : 0.449
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