Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIICKTPRELGIMREAGRIVALTHEELKKHIKPGISTKELDQIAERFIKKQGAIPSFKGYNGFRGSICVSVNEELVHGIPGSRVLKDGDIISIDIGAKLNGYHGDSAWTYPVGNISDDDKKLLEVTEESLYKGLQEAKPGERLSNISHAIQTYVENEQFSVVREYVGHGVGQDLHEDPQIPHYGPPNKGPRLKPGMVLAIEPMVNAGSR-YVKTLADNWTVVTVDGKKCAHFEHTIAITETGFDILTRV
3MX6 Chain:B ((5-251))
MIKIHTEKDFIKMRAAGKLAAETLDFITDHVKPNVTTNSLNDLCHNFITSHNAIPAPLNYKGFPKSICTSINHVVCHGIPNDKPLKNGDIVNIDVTVILDGWYGDTSRMYYVGDVAIKPKRLIQVTYDAMMKGIEVVRPGAKLGDIGYAIQSYAEKHNYSVVRDYTGHGIGRVFHDKPSILNYGRNGTGLTLKEGMFFTVEPMINAGNYDTILSKLDGWTVTTRDKSLSAQFEHTIGVTKDGFEIFT--
General information:
TITO was launched using:
RESULT:
Template:
3MX6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -92930 for 2157 contacts (-43.1/contact) +
2D Compatibility (PS) -26947 + (NN) -12994 + (LL) 292
1D Compatibility (HY) -20400 + (ID) 5100
Total energy: -158079.0 ( -73.29 by residue)
QMean score : 0.599
(partial model without unconserved sides chains):
PDB file :
Tito_3MX6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MX6-query.scw
PDB file :
Tito_Scwrl_3MX6.pdb
: