Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIVTNDQELEGLKKIGRIVALAREEMKRKAEPGMSTKDLDLIGKAVLDEHGAVSAPEKEYDFPGVTCISVNDEVAHGIPSTSKILKAGDLVNIDISAEFGGFYSDTGISFVLGEGEERLHKLCQCAENAFQKGLQQAKAGKRQNQIGRAVYHEARSQGFTVIKTLTGHGIGRSLHEAPNHIMNYYDPFDNALFKNGTVIALEPFIST-KAETIVEAGDGWTFKTPDKSMVAQVEHTIVITKDEPIILTKL
3MX6 Chain:B ((8-245))--IHTEKDFIKMRAAGKLAAETLDFITDHVKPNVTTNSLNDLCHNFITSHNAIPAPLNYKGFPKSICTSINHVVCHGIPN-DKPLKNGDIVNIDVTVILDGWYGDTSRMYYVGDVAIKPKRLIQVTYDAMMKGIEVVRPGAKLGDIGYAIQSYAEKHNYSVVRDYTGHGIGRVFHDKPS-ILNYGRNGTGLTLKEGMFFTVEPMINAGNYDTILSKLDGWTVTTRDKSLSAQFEHTIGVTKD--------


General information:
TITO was launched using:
RESULT:

Template: 3MX6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1359 -99554 -73.26 -420.06
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain B : 0.78

3D Compatibility (PKB) : -73.26
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.617

(partial model without unconserved sides chains):
PDB file : Tito_3MX6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3MX6-query.scw
PDB file : Tito_Scwrl_3MX6.pdb: