Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTPVTTFPLVDAILAGRDRNLDGVILIAAQHLLQTTHAMLRSLFRVGLDPRNVAVIGKCYSTHPGVVDAMRADGIYVDDCSDAYAPHESFDTQYTRHVERFFAESWARLTAGRTARVVLLDDGGSLLAVAGAMLDASADVIGIEQTSAGYAKIVGCALGFPVINIARSSAKLLYESPIIAARVTQTAFERTAGIDSSAAILITGAGAIGTALADVLRPLHDRVDVYDTRSGCMTPIDLPNAIGGYDVIIGATGATSVPASMHELLRPGVLLMSASSSDREFDAVALRRRTTPNPDCHADLRVADGSVDATLLNSGFPVNFDGSPMCGDASMALTMALLAAAVLYASVAVADEMSSDHPHLGLIDQGDIVASF-LNIDVPL-QALSRLPLLSIDGYRRLQVRS---GYTLFRQGERADHFFVIESGELEALVDGKVILRLGAGDHFGEACLLGGMRRIATVRACEPSVLWELDGKAFGDALHGDAAMREIAYGVARTRLMHAGASESLMV |
| 2K0G Chain:A ((5-141)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VRRGDFVRNWQLVAAVPLFQKLG--PAVLVEIVRALRARTVPAGAVICRIGEPGDRMFFVVEGSVSVATPNPV--ELGPGAFFGEMALISGEPRSATVSAATTVSLLSLHSADFQMLCSSSP---EIAEIFRKTALERRGAAAS--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2K0G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -69231 for 945 contacts (-73.3/contact) +
2D Compatibility (PS) -13664 + (NN) -264 + (LL) 25272
1D Compatibility (HY) -8000 + (ID) 2250
Total energy: -68137.0 ( -72.10 by residue)
QMean score : 0.329
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