Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRPLARLRGRRVVPQRSAGELDAMAAAGAVVAAALRAIRAAAAPGTSSLSLDEIA-ESVIRESGATPSFLGYHGYPASICASINDRVVHGIPSTAEVLAPGDLVSIDCGAVLDGWHGDAAITFGVGALSDADEALSEATRESLQAGIAAMVVGNRLTDVAHAIETGTRAAELRYGRSFGIVAGYGGHGIGRQMHMDPFLPNEGAPGRGPLLAAGSVLAIEPMLTLGTTKTVVLDDKWTVTTADGSRAAHWEHTVAVTDDGPRILTLG
4FO7 Chain:B ((6-249))
---------------KTPDDIEKMRIAGRLAAEVLEMIGEHIKPGVTTEELDRICHDYIVNEQKAIPAPLNYKGFPKSICTSINHVVCHGIPN-EKPLKEGDILNVDITVIKDGYHGDTSKMFLVGKTPEWADRLCQITQECMYKGISVVRPGAHLGDIGEIIQ---KHAE---KNGFSVVREYCGHGIGKVFHEEPQVLHYGRAGTGIELKEGMIFTIEPMINQGRPETRLLGDGWTAITKDRKLSAQWEHTVLVTADGYEILTL-
General information:
TITO was launched using:
RESULT:
Template:
4FO7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -105449 for 1873 contacts (-56.3/contact) +
2D Compatibility (PS) -26854 + (NN) -11909 + (LL) 1436
1D Compatibility (HY) -16400 + (ID) 4650
Total energy: -163826.0 ( -87.47 by residue)
QMean score : 0.507
(partial model without unconserved sides chains):
PDB file :
Tito_4FO7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4FO7-query.scw
PDB file :
Tito_Scwrl_4FO7.pdb
: