Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKAIFITGAGSGMGREGATLFHANGWRVGAIDRNEDGLAALRVQLGAERLWARAVDVTDKAALEGALADFCAGNVGGGLDMMWNNAGIGEGGWFEDVPYEAAVRVVDVNFKAVLTGAYAALPYLKKAPGSLMFSTSSSSGTYGMPRIAVYSATKHAVKGLTEALSVEWQRHGVRVADVLPGLIDTAIL---TSTRQHSDEGPYTISAEQIRAAAPKKGMFRLMPSSSVAEAAWRAYQHPTRLHWYVPRSIRWIDRLKGVSPEFVRRHIAKSLATLEPKRK |
4BMS Chain:K ((7-200)) | -KTAVITGGNSGIGLATAKRFVAEGAYVFIVGRRRKELEQAAAEIG-RNVTAVKADVTKLEDLDRLYA--IVREQRGSIDVLFANSGAIEQKTLEEITPEHYDRTFDVNVRGLIFTVQKALPLLRDG-GSVIL-TSSVAGVLGLQAHDTYSAAKAAVRSLARTWTTELKGRSIRVNAVSPGAIDTPIIENQVSTQEEADE-------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BMS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -80125 for 1526 contacts (-52.5/contact) +
2D Compatibility (PS) -20639 + (NN) -10267 + (LL) 6332
1D Compatibility (HY) -9600 + (ID) 3200
Total energy: -117499.0 ( -77.00 by residue)
QMean score : 0.344
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