Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRARRLVMLRHGQTDYNVGSRMQGQLDTELSELGRTQAVAAAEVLGKRQPLLIVSSDLRRAYDTAVKLGERTGLVVRVDTRLRETHLGDWQGLTHAQIDADAPGARLAWR-EDATWAPHGGESRVDVAARSRPLVAELVASEPEWGGADEPDRPVVLVAHGGLIAALSAALLKLPVANWPALGGMGNASWTQLSGHWAPGSDFESIRWRLDVWNASAQVSSDVL
4IJ5 Chain:A ((1-203))
--MVKLILVRHAESEWNPVGRYQGLLDPDLSERGKKQAKLLAQELSREHLDVIYSSPLKRTYLTALEIAEAKNLEVIKEDRIIEIDHGMWSGMLVEEVMEKYPEDFRRWVEEPHKVEFQGGESLASVYNRVKGFLEEVRKR--------HWNQTVVVVSHTVPMRAMYCALLGVDLSKFWS-FGCDNASYSVIHMEE--------RRNVILKLNITCHLGEF--
General information:
TITO was launched using:
RESULT:
Template:
4IJ5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52761 for 1720 contacts (-30.7/contact) +
2D Compatibility (PS) -21948 + (NN) -11625 + (LL) 736
1D Compatibility (HY) -11600 + (ID) 2850
Total energy: -100048.0 ( -58.17 by residue)
QMean score : 0.447
(partial model without unconserved sides chains):
PDB file :
Tito_4IJ5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4IJ5-query.scw
PDB file :
Tito_Scwrl_4IJ5.pdb
: