Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRIDIVTIFPACLD-PLRQSLPGKAIESGLVDLNVHDLRRWTHDVHHSVDDAPYGGGPGMVMKAPVWGEALDEICS-------SETLLIVPTPAGVLFTQATAQRWTTESHLVFACGRYEGIDQRVVQDAARRMRVEEVSIGDYVLPGGESAAVVMVEAVLRLLAGVLGNPASHQDDSHSTGLDGLLEGPSYTRPASWRGLDVPEVLLSGDHARIAAWRREVSLQRTRERRPDLSHPD
4H3Z Chain:A ((22-251))
MQFDIVTLFPDMFRALTDWGITSRAAKQERYGLRTWNPRDFTTDNYRTIDDRPYGGGPGMVMLARPLEDAINAAKAAQAEQGIGGARVVMMSPQGATLNHDKVMRFAAEPGLILLCGRYEAIDQRLIDRV----VDEEVSLGDFVLSGGELPAMALIDAVVRHLPGVLN------QDSFV---DGLLDCPHYTRPEEYDGVRVPDVLLGGHHAEIEQWRRREALRNTWLKRPDLIVQ-
General information:
TITO was launched using:
RESULT:
Template:
4H3Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -136890 for 1537 contacts (-89.1/contact) +
2D Compatibility (PS) -23747 + (NN) -12504 + (LL) 592
1D Compatibility (HY) -16800 + (ID) 4450
Total energy: -193799.0 ( -126.09 by residue)
QMean score : 0.410
(partial model without unconserved sides chains):
PDB file :
Tito_4H3Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4H3Z-query.scw
PDB file :
Tito_Scwrl_4H3Z.pdb
: