Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTRIIGGVAGGRRIAVPPRGTRPTTDRVRESLFNIVTARRDLTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADPPYNVD----SADVDAILAALGTNGWTREGTVAVVERATTCAPLTWPEGWRRWPQRVYGDTRLELAERLFANV
3DMG Chain:A ((234-343))
-------------------------------------------GRQVLDLGAGYGALTLPLARM-GAEVVGVEDDLASVLSLQKGLEANAL-KAQALHSDVDEALT--EEARFDIIVTNPPFHVGGAVILDVAQAFVNVAAA--RLRPGGVFFLVSNPF---------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3DMG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -75366 for 791 contacts (-95.3/contact) +
2D Compatibility (PS) -11867 + (NN) -8828 + (LL) 4388
1D Compatibility (HY) -5200 + (ID) 1500
Total energy: -98373.0 ( -124.37 by residue)
QMean score : 0.581
(partial model without unconserved sides chains):
PDB file :
Tito_3DMG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DMG-query.scw
PDB file :
Tito_Scwrl_3DMG.pdb
: