Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTPSQWLDIAVLAVAFIAAISGWRAGALGSMLSFGGVLLGATAGVLLAPHIVSQISAPRAKLFAALFLILALVVVGEVAGVVLGRAVRGAIRNRPIRLIDSVIGVGVQLVVVLTAAWLLAMPLTQSKEQPELAAAVKGSRVLARVNEAAPTWLKTVPKRLSALLNTSGLPAVLEPFSRTPVIPVASPDPALVNNPVVAATEPSVVKIRSLAPRCQKVLEGTGFVISPDRVMTNAHVVAGS---NNVTVYAG-----DKPFEATVV-SYDPSVDVAILAVPHL-------------PPPPLVFAAEPAKTGADVVVLGYPGGGNFTA----TPARIREAIRLSGPDIYGDPEPVTRDVYTIRADVEQGDSGGPLIDLNGQVLGVVFGAAID--DAETGFVLTAGEVAGQLAKIGATQPVGTGACVS |
| 2AS9 Chain:A ((22-202)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FKDATGFVIGKNTIITNKHVSKDYKVGDRITAHPNGDKGNGGIYKIKSISDYPGDEDISVMNIEEQAVERGPKGFNFNENVQAFNFAK-DAKVDDKIKVIGYPLPAQNSFKQFESTGTIK---------------RIKDNILNFDAYIEPGNSGSPVLNSNNEVIGVVYGGIGKIGSEYNGAVYFTPQIKDFIQKHI------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2AS9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -98982 for 1190 contacts (-83.2/contact) +
2D Compatibility (PS) -17062 + (NN) -7071 + (LL) 18812
1D Compatibility (HY) -9600 + (ID) 1800
Total energy: -115703.0 ( -97.23 by residue)
QMean score : 0.518
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