Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSAPSSFAPPRLELRGISKRYPGCLANDRIDLCIDAGE-IHALLGENGAGKSTLMKIIYGVTRPDAGEIRWQGEPVQV--------RDPARARALGIGMVFQHFSLFETLSVAENIALALGAEAGSPRRLEARIREVSQRYGMPLEPRRLVHGLSIGERQRVEIVRCLMQDIRLLILDEPTSVLTPREAEDLFVTLRRLAEEGCSVLFISHKLAEVRALCQRATVLRGGRVAGQCVPAQCSDLELARLMVGDAEGLAAEYPKV----------------TGGAPFLQVRDLHWRNPDPFGVSFAGLDLEVRSGEILGIAGVAGNGQDELLA-LLSGEVRLPRAQAERIRLGGCAGAHLAPDARRRAGQAFVPAERLGHGAVPEMSLADNALLTAFQQGLVKRGLVRRRKVLALAEEIIRRFAVKAPGAGAPARSLSGGNLQKFILGREILQAPRLLVAAHPTWGVDVGAAALIHRALIAL-RDAGTAILVVSEDLDE-LFLLSDRI-AALCSGRLCPAVATA-S-ASP-QKVGGWMAGQFEA-------------PAAVAGAVAQGSL---- |
| 1YQT Chain:A ((24-538)) | -EEDCVHRYGVNAFVLYR-------------LPVVKEGMVVGIVGPNGTGKSTAVKILAGQLIPNLCGDNDSWDGVIRAFRGNELQNYFEKLKNGEIRPVVKP----QYVDLIPKAVKGKVIELLKKADETGKLEEVVKALELENVLEREIQHLSGGELQRVAIAAALLRNATFYFFDEPSSYLDIRQRLNAARAIRRLSEEGKSVLVVEHDLAVLDYLSDIIHVVYGEPGVYGIF---SQPKGTRNGINEFLRGYLKDENVRFRPYEIKFTKTGERVEIERETLVTYPRLVKDYGS---FRLEVEPGEIKKGEVIGIVGPNGIGKTTFVKMLAG-------------------------VEEPTEGKIEWDLTVAYKPQYIKADYEGT------VYELLSKIDASKLNSNFYKTELLKPLGIIDLYDREVNE-LSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHLMEKNEKTALVVEHDV-LMIDYVSDRLMVFEGEPGKYGRALPPMGMREGMNRFLASIGITFRRDPDTGRPRANKEGSVKDREQKEKGEYYYIA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YQT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -201341 for 3862 contacts (-52.1/contact) +
2D Compatibility (PS) -49847 + (NN) -20188 + (LL) 3180
1D Compatibility (HY) -15200 + (ID) 4250
Total energy: -287646.0 ( -74.48 by residue)
QMean score : 0.283
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