Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSRTWIRNPLAIFTANG----LDAAGGLVVEDGRIVELLGAGQQPAQPCASQFDASRHVVLPGLVNTHHHFYQTLTRAWAPVVNQPLFPWLKTL-YPVWA-RLTPEKLELATKVALAELLLSGCTTAADHHYLFPGGLEQAIDVQAGVVEELGMRAMLTRGSMSLGEKDGGLPPQQTVQEAETILADSERLIARYHQR--GDGARVQIALAPCSPFSVTPEIMRASAEVAARHDVRLHTHLAETLDEEDFCLQRFGLRTVDYLDSVGWLGPRTWLAHGIHFNAEEIRRLGEAGTGICHCPSSNMRLASGICPTVELEAAGAPIGLGVDGSASNDASNMILEARQALYLQRLRYG-AERITPELALGWATRGSARLLGRS-DIGELAPGKQADLALFKLDELRFSGSHDPLSALLLCAA-DRADRVMVGGAWRVVDGAVEGLDLAALIARHRAAASALIAG |
| 3LNP Chain:A ((23-466)) | -ADLRINSHW-IIPIENTVSNILIDHCLLIKDGIILAIEPQSSCQ-IPATETLDLGQQVLMPGWVNAHGHAAMSLFRGLAD--DLPLMTWLQEHVWPAEAQHVDEHFVKQGTELAIAEMIQSGTTTFADMYFY-PQ-------QSGEAALAAGIRAVCFAPVLDFPTN--------YAQNADEYIRKAIECNDRFNNHPMNEQGLVQIGFGPHAPYTVSDEPLKEITMLSDQLDMPVQIHLHETDFEVSESLETFNKRPTQRLADIGFLNERVSCVHMTQVDDGDIKILQKTGASIIHCPESNLKLASGFCPIAKLSAANIPLAIGTDGAASNNDLDMFSETKTAALLAKGVSQDASAIPAIEALTMATLGGARALGIDDITGSLKPGKAADIQAIDLNTLSSQPVFDPVSHMVYCTKSTQVSHVWVNGRCLLKNGELTTLNEETLINHAKAWASAIRTP |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LNP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -206479 for 3987 contacts (-51.8/contact) +
2D Compatibility (PS) -46453 + (NN) -22292 + (LL) 1228
1D Compatibility (HY) -23200 + (ID) 6300
Total energy: -303496.0 ( -76.12 by residue)
QMean score : 0.540
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