Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------MSKRPNFLVIVADDLGFSDIG-AFGGEIATPNLDALAIAGLRLTDFHTASTCSPTRSMLLTGTDHHIAGIGTMAEALTPELEGKPGYEGHLNERVVALPELLREA-GYQTLMAGKWHLGLKPEQTPHARGFERSFSLLPGAANHYGFEPPYDESTPRILKGTPALYVEDERYLDTLPEGFYSSDAFGDKLLQYLKERDQSRPFFAYLPFSAPHWPLQAPREIVEKYRGRYDAGPEALRQERLARLKELGLVEADVEAHPVLALTREWEALEDEERAKSARAMEVYAAMVERMDWNIGRVVDYLRRQGELDNTFVLFMSDNGAEGALLEAFPKFGPDLLGFLDRHYDNSLENIGRANSYVWYGPRWAQAATAPSRLYKAFTTQGGIRVPALVRYPRLSRQGAISHAFATVMDVTPTLLDLAGVRHPGKRWRGREIAEPRGRSWLGWLSGETEAAHDENTVTGWELFGMRAIRQGDWKAVYLPAPVGPATWQLYDLARDPGEIHD---LADSQPGKLAELIEHWKRYVSETGVVEGASPFLVR |
| 2W5Q Chain:A ((1-424)) | SEDDLTKVLNYTKQRQTEPNPEYYGVAKKKNIIKIHLESFQTFLINKKVNGKEVTPFLNKLSSGKEQFTYF---------PNFFHQTGQGKTSDSEFTMDNSLYGLPQGSAFSLKGDNTYQSLPAILDQKQGYKSDVMH---------------GDYKTFWNRDQVYKHFGIDKFYDATY----------YDMSDKNVVNLG---LKDKIFFKDSANYQAKMKS--PFYSHLITLTNHYPFTLDEKD-----------------------ATIEKSNTG------------------------DATVDGYIQTARYLDEALEEYINDLKKKGLYDNSVIMIYGDHYG------------------ISENHNNAMEKLLGEKI-------------------TPAKFTDLNRTGFWIKIP--GKSGGINNEYAGQVDVMPTILHLAGIDTKNYLMFGTDLFSKGHNQVVPFRNGD--FITKDYKYVNGKIYSNKNNELITTQ----PADFEKNKKQVEKDLEMSDNVLNGDLFRFYKNPDFKKVNPSKYKYETGPK----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2W5Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -127207 for 3476 contacts (-36.6/contact) +
2D Compatibility (PS) -41465 + (NN) -12125 + (LL) 9892
1D Compatibility (HY) -12400 + (ID) 3000
Total energy: -186305.0 ( -53.60 by residue)
QMean score : 0.335
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