Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKPLLHAFAPGVMALMLLLPQAAQAKEVAPQQKLSNVVILATGGTIAGAGASAANSATYTAAKVPVDQLLASVPQLKDIANVRGEQVFQIASESFTNENLLELGKTVAKLADSDDVDGIVITHGTDTLEETAYFLTLVEHTEKPIVVVGSMRPGTAMSADGMLNLYNAVAVAGDKSARGKGVLITMNDEILSGRDASKMVNIKTEAFKSP-WGPLGMVVEGKSYWFRAPVKRHTVNSEFDIKQISALAPVEIAYSYGNVSDTAYKALAQAGAKAIIHAGTGNGSVPARVVPTLQELRKQGVQIIRSSHVNAGGFVLRNAEQPDDKNDWIVAHDLNPQKARILAAVAMTKTQDSKELQRIFWEY
2JK0 Chain:D ((2-325))---------------------------------LPNIVILATGGTIAGSAAANTQ-----AGALGVETLIQAVPELKTLANIKGEQVASIGSENMTSDVLLTLSKRVNELLARSDVDGVVITHGTDTLDESPYFLNLTVKSDKPVVFVAAMRPATAISADGPMNLYGAVKVAADKNSRGRGVLVVLNDRIGSARFISKTNASTLDTFKAPEEGYLGVIIGDKIYYQTRLDKVHTTRSVFDVTNVDKLPAVDIIYGYQDDPEYMYDASIKHGVKGIVYAGMGAGSVSKRGDAGIRKAESKGIVVVRSSRTGS-GIVPPDAGQP-----GLVADSLSPAKSRILLMLALTKTTNPAVIQDYFHAY


General information:
TITO was launched using:
RESULT:

Template: 2JK0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -191501 for 2865 contacts (-66.8/contact) +
2D Compatibility (PS) -34623 + (NN) -18918 + (LL) 3188
1D Compatibility (HY) -25200 + (ID) 7200
Total energy: -274254.0 ( -95.73 by residue)
QMean score : 0.784

(partial model without unconserved sides chains):
PDB file : Tito_2JK0.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2JK0-query.scw
PDB file : Tito_Scwrl_2JK0.pdb: