Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSVYAIIGGTGLTQLEGLTLSESLPIETPYGAPSAPLQRGRYAGREVLFLARHGHPHRFPPHQVNYRANLWALKQAGAEAVIAVNAVGGIHAAMGTGHLCVPHQLIDYTSGREH-TYFAGDIEHVTHIDFSHPYDEPLRQRLIEALRALGLAHSSHGVYACTQGPRLETVAEIARLER-DGNDIVGMTGMPEAALARELDLPYACLALVVNPAAGKSAGIITMAEIEQALHDGIGKVREVLARVLAG
1WTA Chain:A ((12-253))
-AHVGVIGGSGLYDPGIVENPVEVKVSTPYGNPSDFIVVGDVAGVKVAFLPRHGRGHRIPPHAINYRANIWALKALGVKWVISVSAVGSLREDYRPGDFVVPDQFIDMTKNRRHYTFYDGP--VTVHVSMADPFCEDLRQRLIDSGRRLGYTVHERGTYVCIEGPRFSTRAESRVWKDVFKADIIGMTLVPEINLACEAQLCYATLAMVTDYDVWAD-RPVTAEEVERVMISNVERARRMLYDVIP-
General information:
TITO was launched using:
RESULT:
Template:
1WTA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -169483 for 2028 contacts (-83.6/contact) +
2D Compatibility (PS) -26471 + (NN) -16595 + (LL) 488
1D Compatibility (HY) -19200 + (ID) 4750
Total energy: -236011.0 ( -116.38 by residue)
QMean score : 0.557
(partial model without unconserved sides chains):
PDB file :
Tito_1WTA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WTA-query.scw
PDB file :
Tito_Scwrl_1WTA.pdb
: