Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFERPILITGGAGFIGSHLTDALLARGY------RVRVLDNLS-TGKRDNL-PLD-DERVELLEGDAADAATLAAALKGCAAVAHLAAVASVQASVDDPVATHQSNFIATLNLCEAMREQGVKRVVFASSAAVYGQNGEGTAIDEDTPKSPLTPYASDKLASEYYLDFYRRQHGLEPAIFRFFNVYGPRQDPSSPYSGVISIFTERALKGTPITVFGDGEQTRDFIYVADLVDFLVQALE-ATAVEPGAVNVGL---NRSISLKQLLAEIGQVLGGLPPVTHADARAGDIRHSRANNERLLRRFRFDQPTPMGVGLARLLGR |
| 1R66 Chain:A ((3-306)) | -----LLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTDEVYGSIDSGSWT-ESSPLEPNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPEK----LIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGRAGEIYHIGGGLELTNRELT-GILLDSLGADWSSVRKV--ADRKGHDLRYS-LDGGKIERELGYRPQVSFADGLAR---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1R66.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -147603 for 2519 contacts (-58.6/contact) +
2D Compatibility (PS) -31662 + (NN) -17052 + (LL) 732
1D Compatibility (HY) -18800 + (ID) 5250
Total energy: -219635.0 ( -87.19 by residue)
QMean score : 0.493
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