Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKEKFERNKPHVNVGTIGHVDHGKTTLTAALTKVCSDTWGGSARAFDQI--------DNAPEEKARGITINTSHVEYDSAVRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHILLSRQVGVPYIVVFLNKADMVD-DAELLELVEMEVRDLLNTYDFPGDDTPIIIGSALMA--LEGKDDNGIGVSAVQKLVETLDSYIPEPVRAIDQPFLMPIEDVFSISGRGTVVTGRVERGIIKVQEEVEIVGIKATTKTTCTG----VEMFRKLLDEGRAGENVGILLRGTKREDVERGQVLAK----PGTIKPHTKFECEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDV--------------TGNCELPEGVEMVMPGDNIKMVVTLIAPIAMEDGL------RFAIREGGRTVGAGVVAKIIE |
| 3WY9 Chain:A ((5-424)) | ---------KPHVNIVFIGHVDHGKSTTIGRLLYDTGNIPETIIKKFE--SFKFAWVMDRLKEERERGITIDVAHTKFETPHRYITIIDAPGHRDFVKNMITGASQADAAVLVVAATDGVMPQTKEHAFLARTLGIKHIIVTINKMDMVNYDQKVFEKVKAQVEKLLKTLGY--KDFPVIPTSAWNGDNVVKKSDKMPWYNG-PTLIEALDQ-IPEPEKPIDKPLRIPIQDVYSIKGVGTVPVGRVETGKLKVGDVVIFEPASTIFHKPIQGEVKSIEMHHEPLQEALPGDNIGFNVRGVSKNDIKRGDVAGHTDKPPTVVRTKDTFKAQIIVLNHP-----TAITVGYSPVLHAHTAQIPVRFEQILAKVDPRTGNI-VEENPQFIKTGDSAIVVLRPMKPVVLEPVKEIPQLGRFAIRDMGMTIAAGMVISI-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WY9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -204056 for 3006 contacts (-67.9/contact) +
2D Compatibility (PS) -40884 + (NN) -17543 + (LL) 1452
1D Compatibility (HY) -24000 + (ID) 7450
Total energy: -292481.0 ( -97.30 by residue)
QMean score : 0.506
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