Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSMADRDGVIWYDGELVQWRDATTHVLTHTLHYGMGVFEGVRAYDTPQGTAI-FRLQAHTDRLFDSAHIMNMQIPYSRDEIN-EATRA--AVRENNL------ESAYIRPMVFYGSEGMGLRASGLKVHVIIAAWSWGAYMGEEALQQGIKVRTSSFTRHHVNIS---MTRAKSNGAYINSMLALQEAISGGADEAMMLDP--EGYVAEGSGENIFII----KDGVIYTPEVT-ACLNGITRNTILTLAAEHGFKLVEKRITRDEVYIA------DEAFFTGTAAEVTPIREV---DGR-KIGAGRRGPVTEKLQKAYFDLVSGKTEAHAEWRTLVK |
| 3DTG Chain:A ((54-350)) | ----------WHNAQVIPYGPIQLDPSAIVLHYGQEIFEGLKAYRWADGSIVSFRPEANAARLQSSAR--RLAIPELPEEVFIESLRQLIAVDEKWVPPAGGEESLYLRPFVIATEPGLGVRPSNEYRYLLIASPA-GAY-----FKGGIKPVSVWLSHEYVRASPGGTGAAKFGGNYAASLLAQAQAAEMGCDQVVWLDAIERRYVEEMGGMNLFFVFGSGGSARLVTPELSGSLLPGITRDSLLQLATDAGFAVEERKIDVDEWQKKAGAGEITEVFACGTAAVITPVSHVKHHDGEFTIADGQPGEITMALR---------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3DTG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -74051 for 2038 contacts (-36.3/contact) +
2D Compatibility (PS) -29053 + (NN) -3242 + (LL) 3580
1D Compatibility (HY) -17200 + (ID) 4850
Total energy: -124816.0 ( -61.24 by residue)
QMean score : 0.349
|
|
|