Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSSNIPQNAVEVDTLSSIYTYKELSIDKLKHEYEITVGSNYIEQKVNSRLQEIAKNAKLPGFRSGKMPYDLVVTNYKNEALEYVVNSTIDYCSSDLMKKIEVKSHIYPKVDIMSLPNLNEEGEKSNFVYKLSFESMPEVPVIDLDKINLKKVEARIEEEDIKGFVDSIKTRFPSFVSVDDASYQAKNGDKLVIDFEGRI-RNKLFQGGSN--KNFKVTLGSGTFINGFENQLTGMKKGETKSFKLKFPEDYQTI-----SLAGQEANFSVRVNDIQVAEDFGGDDEMAKKIGFRDCSSLKNHAKEVIGGQCEEMRDLLIKKELFDYLDANYSFDLPTDVVRQEQQRVERELGSKDDSCKEAERRVKLAMLFMKFSTEHKISLTQNDILNVIVNQYISKDVPFDRVFKHFKSDRQFQELVRGQALEHKVTSYIIEKVNKEEQIVSVKELKELFGNI |
| 2PBC Chain:A ((4-100)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IKSRKGDVLHMHYTGKLEDGTEFDSSLPQNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAPPKIPGGATLVFEVELLKIERRT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PBC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -12743 for 621 contacts (-20.5/contact) +
2D Compatibility (PS) -9096 + (NN) 1192 + (LL) 25384
1D Compatibility (HY) -6000 + (ID) 1050
Total energy: -2313.0 ( -3.72 by residue)
QMean score : 0.441
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