Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRTPIIAGNWKMNKTVQEAKDFVNALPTLPDSKEVESVICAPAIQLDALTTAVKEGKAQGLEIGAQNTYFEDNGAFTGETSPVALADLGVKYVVIGHSERRELFHETDEEINKKAHAIFKHGMTPIICVGETDEERESGKANDVVGEQVKKAVAGLSEDQLKSVVIAYEPIWAIGTGKSSTSEDANEMCAFVRQTIADLSSKEVSEATRIQYGGSVKPNNIKEYMAQTDIDGALVGGASLKVEDFVQLLEGAK |
1SW7 Chain:B ((4-244)) | -RKFFVGGNWKMNGDKKSLGELIHTLNGAKLSADTEVVCGAPSIYLDF----ARQKLDAKIGVAAQNCYKVPKGAFTGEISPAMIKDIGAAWVILGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGITEKVVFEQTK-AIADNVKDWSK-VVLAYEPVWAIGTGNSSTPQQAQEVHEKLRGWLKSHVSDAVAQSTRIIYGGSVTGGNCKELASQHDVDGFLVGGASLKPE-FVDII---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SW7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -78715 for 2070 contacts (-38.0/contact) +
2D Compatibility (PS) -26224 + (NN) -12613 + (LL) 732
1D Compatibility (HY) -15200 + (ID) 5350
Total energy: -137370.0 ( -66.36 by residue)
QMean score : 0.601
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