Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKEIAKSLLDIEAVTLSPNDLYTWSSGIKSPIYCDNRVTLGYPLVRGAIRDGLINLIKEHFPEVEVISGTATAGIPHAAFIAEKLKLPMNYVRSSNKSHGKQNQIEGAKSEGKKVVVIEDLISTGGSSVTAVEALKQAGAEVLGVVAIFTYGLKKADDTFSNIQLPFYTLSDYNELIEVAENEGKISSEDIQTLVEWRDNLA
2AEE Chain:A ((6-207))
-ASQIATQLLDIKAVYLKPEDPFTWASGIKSPIYTDNRVTLSYPKTRDLIENGFVETIKAHFPEVEVIAGTATAGIPHGAIIADKMTLPFAYIRSKPK----GNQIEGRVLKGQKMVIIEDLISTGGSVLDAAAAASREGADVLGVVAIFTYELPKASQNFKEAGIKLITLSNYTELIAVAKLQGYITNDGLHLLKKFKEDQV
General information:
TITO was launched using:
RESULT:
Template:
2AEE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -129167 for 1643 contacts (-78.6/contact) +
2D Compatibility (PS) -21357 + (NN) -6089 + (LL) 116
1D Compatibility (HY) -19600 + (ID) 5500
Total energy: -181597.0 ( -110.53 by residue)
QMean score : 0.650
(partial model without unconserved sides chains):
PDB file :
Tito_2AEE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2AEE-query.scw
PDB file :
Tito_Scwrl_2AEE.pdb
: