Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNRDFRVRDQLETFGVRVSALIIENQKLLLIYAPHLDKYYLPGGALQVGEDSNKAVAREVLEEIGLHSQVGDLAYIVENQFNIKRHHYHSVEFLYFVNLLGQAPESIKEGTHKRHFVWLPIKELTKIDCNPNFLAQDLIEWPGHVVHKIVQN
3I7U Chain:A ((2-130))
-------------KKEFSAGGVLFKDGEVLLIKTP-SNVWSFPKGNIEPGEKPEETAVREVWEETGVKGEILDYIGEIHYWYTLKGERIFKTVKYYLMKYKEG-EPRP--SWEVKDAKFFPIKEAKKLLKYK-GDKEIFEKALKLKEKFK---
General information:
TITO was launched using:
RESULT:
Template:
3I7U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -84805 for 1008 contacts (-84.1/contact) +
2D Compatibility (PS) -13945 + (NN) 446 + (LL) 1652
1D Compatibility (HY) -2400 + (ID) 1100
Total energy: -100152.0 ( -99.36 by residue)
QMean score : 0.384
(partial model without unconserved sides chains):
PDB file :
Tito_3I7U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3I7U-query.scw
PDB file :
Tito_Scwrl_3I7U.pdb
: