Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAERKTLLLTGASRGIGHATVKYFNAAGWRVF-TASRQSWA---SECPWADGEENH-IHLDLEDIPGVEASLELIREKLGDGRLHALVDNAGISPKGEGGERLGVLETDYATWLRVFNVNLFSTALLARGLFAEL-KAAQGTVINVTSIAGSKVHPFAGVAYATSKAALSALTREMAHDFGPHGVRVNAIAPGEIDTSI---LSPGTEEIVERSIPLHRLGRPEEIASLIYFLCTSGASYVNGAEIHVNGGQHV |
| 4AG3 Chain:B ((28-268)) | ----KVALVTGASRGIGQAIALELGRLGAVVIGTATSASGAEKIAETLKANGVEGAGLVLDVSSDESVAATLEHIQQHLGQPLI--VVNNAGITR-----DNLLVRMKD-DEWFDVVNTNLNSLYRLSKAVLRGMTKARWGRIINIGSVVGAMGNA-GQTNYAAAKAGLEGFTRALAREVGSRAITVNAVAPGFIDTDMTRELPEAQREALLGQIPLGRLGQAEEIAKVVGFLASDGAAYVTGATVPVNGGMYM |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4AG3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -88970 for 1957 contacts (-45.5/contact) +
2D Compatibility (PS) -24797 + (NN) -7427 + (LL) 620
1D Compatibility (HY) -15600 + (ID) 4700
Total energy: -140874.0 ( -71.98 by residue)
QMean score : 0.425
|
|
|